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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823764.1_cds_XP_016501615.1_15329
CDS Infomation

[gene=LOC107819938] [db_xref=GeneID:107819938] [protein=IAA-amino acid hydrolase ILR1-like 4] [protein_id=XP_016501615.1] [location=complement(join(24016..24426,24697..24825,26470..26784,27445..27570,28034..28378))] [gbkey=CDS]
Sequence

ATGGATTTCTCCAGATGGGTTTTCTTGATTTTGATTTTTGTTTCATTTTTTGCCATACCC
ATTTGGTCAGACTCTTCATTATCAGAAATTCCTATTAATTTTCTCAATTTTGCAAAGAAG
GCTGAGGTTTTTGATTGGATTGTGGGGGTGAGGAGAAGGATACATGAGAATCCAGAGCTG
GGATATGAAGAATTTGAGACCAGTAAGCTTATAAGGGAAGAATTGGATAAGTTGGGGATT
TCATACAAATACCCTTTTGCTACTACTGGTGTTGTTGGTTTTATTGGTTCAGGAAAACCC
CCTTTTGTTGCAATTAGAGCTGATATGGATGCTCTCCCTATGCAGGAAATGGTGGACTGG
GCGCACAAAAGTAAAAACGCTGGGAAAATGCATGCATGTGGCCATGATGCTCATGTTGCA
ATGCTTCTTGGTGCTGCAAAGATTCTTCAAGAACATCCAGACATTTTGAAGGGAACAGTT
GCTCTTGTTTTTCAACCAGCAGAGGAGGGAGGTGGTGGGGCCAAAAAAATGATAGATGCT
GGAGCACTAGAAAACATAGAAGCAATATTTGGTCTGCATGTCAATCCCCAGTTTCCTTTG
GGTAAAGTTTCTTCAAGGCCTGGACCTTTTTTGGCTGGAAGTGGTTTTTTCGAAGCTGTA
ATAAGTGGAAAAGGGGGTCATGCCGCTATTCCACAGCATTCGATAGACCCAATTCTTGCA
GCATCAAATGTAATTGTCAGCTTACAGCATCTTGTTTCCCGAGAGGCTGATCCTCTGGAT
TCTCAGGTAGTCACAGTTGCTAAATTCCAAGGAGGTGGTGCATTTAACGTTATTCCAGAC
TCTGTTACCATCGGTGGCACTTTTCGGGCCTTTTCAAAGGAGAGCTTTCAGCAGCTTAGG
CAGCGAATTGAGGAGGTTATTGTTGGGCAAGCTGCTGTACAGAGATGCAATGCAACTGTG
GATTTTTTAACAAAAGAAAAACCCTTCTTCCCTCCAACCGTGAACGATAAAAACTTGCAC
AAACACTTCCAGAGAGTTGCAGGTGATATGCTTGGTAACGATCATGTAAAAGACATGGAA
CCACTAATGGGATCGGAGGATTTTGCGTTTTACCAAGAGGTTATTCCTGGTTACTTCTAC
CTACTCGGAATGCAGGATGAAACAAATGAAAAACTTGTTTCAGTCCATTCACCTTATTTT
AAAATCAACGAAGAAGCACTTCCTATCGGTGCTGCACTTCAAGCATCTTTGGCTATCAGA
TATCTTCTCGAAGCACAACCACAAGTTCCTTCGTCAAGTATAAATGATCACCACGATGAA
TTGTAA

Peptide Sequence

PEP ID

XP_016501615.1
PEP Infomation

PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Nicotiana tabacum]
Sequence

MDFSRWVFLILIFVSFFAIPIWSDSSLSEIPINFLNFAKKAEVFDWIVGVRRRIHENPEL
GYEEFETSKLIREELDKLGISYKYPFATTGVVGFIGSGKPPFVAIRADMDALPMQEMVDW
AHKSKNAGKMHACGHDAHVAMLLGAAKILQEHPDILKGTVALVFQPAEEGGGGAKKMIDA
GALENIEAIFGLHVNPQFPLGKVSSRPGPFLAGSGFFEAVISGKGGHAAIPQHSIDPILA
ASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFQQLR
QRIEEVIVGQAAVQRCNATVDFLTKEKPFFPPTVNDKNLHKHFQRVAGDMLGNDHVKDME
PLMGSEDFAFYQEVIPGYFYLLGMQDETNEKLVSVHSPYFKINEEALPIGAALQASLAIR
YLLEAQPQVPSSSINDHHDEL

Transcript Sequence

Gene sequence data has not been registered.